Index

_

__post_init__() (crunchflow.input.databases.aqueous.AqueousKinetics method) (crunchflow.input.databases.aqueous.database_entities.AqueousKinetics method) (crunchflow.input.databases.AqueousKinetics method) (crunchflow.input.databases.common.AqueousKinetics method) (crunchflow.input.databases.common.DebyeHuckelSet method) (crunchflow.input.databases.DebyeHuckelSet method) (crunchflow.input.databases.MineralKinetics method) (crunchflow.input.databases.SurfaceComplex method) (crunchflow.input.databases.thermo.database_entities.MineralKinetics method) (crunchflow.input.databases.thermo.database_entities.SurfaceComplex method) (crunchflow.input.databases.thermo.MineralKinetics method) (crunchflow.input.databases.thermo.SurfaceComplex method) (crunchflow.input.MineralKinetics method) (crunchflow.input.SurfaceComplex method) __repr__() (crunchflow.input.blocks.Condition method) (crunchflow.input.Condition method) __str__() (crunchflow.input.AqueousDatabase method) (crunchflow.input.AqueousReaction method) (crunchflow.input.blocks.AqueousKinetics method) (crunchflow.input.blocks.BoundaryConditions method) (crunchflow.input.blocks.Condition method) (crunchflow.input.blocks.DatabaseBlock method) (crunchflow.input.blocks.Discretization method) (crunchflow.input.blocks.Erosion method) (crunchflow.input.blocks.Flow method) (crunchflow.input.blocks.Gases method) (crunchflow.input.blocks.InitialConditions method) (crunchflow.input.blocks.IonExchange method) (crunchflow.input.blocks.Isotopes method) (crunchflow.input.blocks.KeywordBlock method) (crunchflow.input.blocks.KineticsBlock method) (crunchflow.input.blocks.Minerals method) (crunchflow.input.blocks.Output method) (crunchflow.input.blocks.Pest method) (crunchflow.input.blocks.Porosity method) (crunchflow.input.blocks.PrimarySpecies method) (crunchflow.input.blocks.Runtime method) (crunchflow.input.blocks.SecondarySpecies method) (crunchflow.input.blocks.SpeciesBlock method) (crunchflow.input.blocks.SurfaceComplexation method) (crunchflow.input.blocks.Temperature method) (crunchflow.input.blocks.Title method) (crunchflow.input.blocks.Transport method) (crunchflow.input.Condition method) (crunchflow.input.databases.aqueous.AqueousDatabase method) (crunchflow.input.databases.aqueous.AqueousKinetics method) (crunchflow.input.databases.aqueous.AqueousReaction method) (crunchflow.input.databases.aqueous.database.AqueousDatabase method) (crunchflow.input.databases.aqueous.database_entities.AqueousKinetics method) (crunchflow.input.databases.aqueous.database_entities.AqueousReaction method) (crunchflow.input.databases.AqueousDatabase method) (crunchflow.input.databases.AqueousKinetics method) (crunchflow.input.databases.AqueousReaction method) (crunchflow.input.databases.common.AqueousKinetics method) (crunchflow.input.InputFile method) (crunchflow.input.inputfile.InputFile method) (crunchflow.input.KeywordBlock method) (crunchflow.output.main_output.SpeciationBlockCollection method) (crunchflow.output.Speciation method) (crunchflow.output.speciation.Speciation method) (crunchflow.output.SpeciationBlockCollection method)

C

clear() (crunchflow.input.AqueousDatabase method) (crunchflow.input.databases.aqueous.AqueousDatabase method) (crunchflow.input.databases.aqueous.database.AqueousDatabase method) (crunchflow.input.databases.AqueousDatabase method) (crunchflow.input.databases.thermo.database.ThermoDatabase method) (crunchflow.input.databases.thermo.ThermoDatabase method) (crunchflow.input.databases.ThermoDatabase method) (crunchflow.input.ThermoDatabase method) convert_mgL() (crunchflow.output.TimeSeries method) (crunchflow.output.timeseries.TimeSeries method) correct_exponent() (in module crunchflow.util) crunchflow module crunchflow.input module crunchflow.input.AqueousDatabase (built-in class) crunchflow.input.AqueousReaction (built-in class) crunchflow.input.blocks module crunchflow.input.blocks.AqueousKinetics (built-in class) crunchflow.input.blocks.BoundaryConditions (built-in class) crunchflow.input.blocks.Condition (built-in class) crunchflow.input.blocks.DatabaseBlock (built-in class) crunchflow.input.blocks.Discretization (built-in class) crunchflow.input.blocks.Erosion (built-in class) crunchflow.input.blocks.Flow (built-in class) crunchflow.input.blocks.Gases (built-in class) crunchflow.input.blocks.InitialConditions (built-in class) crunchflow.input.blocks.IonExchange (built-in class) crunchflow.input.blocks.Isotopes (built-in class) crunchflow.input.blocks.KeywordBlock (built-in class) crunchflow.input.blocks.KineticsBlock (built-in class) crunchflow.input.blocks.Minerals (built-in class) crunchflow.input.blocks.Output (built-in class) crunchflow.input.blocks.Pest (built-in class) crunchflow.input.blocks.Porosity (built-in class) crunchflow.input.blocks.PrimarySpecies (built-in class) crunchflow.input.blocks.Runtime (built-in class) crunchflow.input.blocks.SecondarySpecies (built-in class) crunchflow.input.blocks.SpeciesBlock (built-in class) crunchflow.input.blocks.SurfaceComplexation (built-in class) crunchflow.input.blocks.Temperature (built-in class) crunchflow.input.blocks.Title (built-in class) crunchflow.input.blocks.Transport (built-in class) crunchflow.input.Condition (built-in class) crunchflow.input.databases module crunchflow.input.databases.aqueous module crunchflow.input.databases.aqueous.AqueousDatabase (built-in class) crunchflow.input.databases.aqueous.AqueousKinetics (built-in class) crunchflow.input.databases.aqueous.AqueousReaction (built-in class) crunchflow.input.databases.aqueous.database module crunchflow.input.databases.aqueous.database.AqueousDatabase (built-in class) crunchflow.input.databases.aqueous.database_entities module crunchflow.input.databases.aqueous.database_entities.AqueousKinetics (built-in class) crunchflow.input.databases.aqueous.database_entities.AqueousReaction (built-in class) crunchflow.input.databases.AqueousDatabase (built-in class) crunchflow.input.databases.AqueousKinetics (built-in class) crunchflow.input.databases.AqueousReaction (built-in class) crunchflow.input.databases.common module crunchflow.input.databases.common.AqueousKinetics (built-in class) crunchflow.input.databases.common.DebyeHuckelSet (built-in class) crunchflow.input.databases.common.ParseError crunchflow.input.databases.common.Reaction (built-in class) crunchflow.input.databases.common.ValidationError crunchflow.input.databases.DebyeHuckelSet (built-in class) crunchflow.input.databases.Exchange (built-in class)

crunchflow.input.databases.GasSpecies (built-in class) crunchflow.input.databases.MineralKinetics (built-in class) crunchflow.input.databases.Minerals (built-in class) crunchflow.input.databases.ParseError crunchflow.input.databases.PrimarySpecies (built-in class) crunchflow.input.databases.Reaction (built-in class) crunchflow.input.databases.SecondarySpecies (built-in class) crunchflow.input.databases.SurfaceComplex (built-in class) crunchflow.input.databases.SurfaceComplexParams (built-in class) crunchflow.input.databases.thermo module crunchflow.input.databases.thermo.database module crunchflow.input.databases.thermo.database.ThermoDatabase (built-in class) crunchflow.input.databases.thermo.database_entities module crunchflow.input.databases.thermo.database_entities.Exchange (built-in class) crunchflow.input.databases.thermo.database_entities.GasSpecies (built-in class) crunchflow.input.databases.thermo.database_entities.MineralKinetics (built-in class) crunchflow.input.databases.thermo.database_entities.Minerals (built-in class) crunchflow.input.databases.thermo.database_entities.PrimarySpecies (built-in class) crunchflow.input.databases.thermo.database_entities.SecondarySpecies (built-in class) crunchflow.input.databases.thermo.database_entities.SpeciesBase (built-in class) crunchflow.input.databases.thermo.database_entities.SurfaceComplex (built-in class) crunchflow.input.databases.thermo.database_entities.SurfaceComplexParams (built-in class) crunchflow.input.databases.thermo.Exchange (built-in class) crunchflow.input.databases.thermo.GasSpecies (built-in class) crunchflow.input.databases.thermo.MineralKinetics (built-in class) crunchflow.input.databases.thermo.Minerals (built-in class) crunchflow.input.databases.thermo.PrimarySpecies (built-in class) crunchflow.input.databases.thermo.SecondarySpecies (built-in class) crunchflow.input.databases.thermo.SurfaceComplex (built-in class) crunchflow.input.databases.thermo.SurfaceComplexParams (built-in class) crunchflow.input.databases.thermo.ThermoDatabase (built-in class) crunchflow.input.databases.ThermoDatabase (built-in class) crunchflow.input.databases.ValidationError crunchflow.input.Exchange (built-in class) crunchflow.input.GasSpecies (built-in class) crunchflow.input.inputfile module crunchflow.input.InputFile (built-in class) crunchflow.input.inputfile.InputFile (built-in class) crunchflow.input.KeywordBlock (built-in class) crunchflow.input.MineralKinetics (built-in class) crunchflow.input.Minerals (built-in class) crunchflow.input.PrimarySpecies (built-in class) crunchflow.input.SecondarySpecies (built-in class) crunchflow.input.SurfaceComplex (built-in class) crunchflow.input.SurfaceComplexParams (built-in class) crunchflow.input.ThermoDatabase (built-in class) crunchflow.output module crunchflow.output.main_output module crunchflow.output.main_output.MainOutputFile (built-in class) crunchflow.output.main_output.SpeciationBlockCollection (built-in class) crunchflow.output.MainOutputFile (built-in class) crunchflow.output.spatial module crunchflow.output.spatial.SpatialProfile (built-in class) crunchflow.output.SpatialProfile (built-in class) crunchflow.output.speciation module crunchflow.output.Speciation (built-in class) crunchflow.output.speciation.Speciation (built-in class) crunchflow.output.SpeciationBlockCollection (built-in class) crunchflow.output.timeseries module crunchflow.output.TimeSeries (built-in class) crunchflow.output.timeseries.TimeSeries (built-in class) crunchflow.util module

E

extract() (crunchflow.output.spatial.SpatialProfile method) (crunchflow.output.SpatialProfile method)

F

format_class_name() (in module crunchflow.input.inputfile) from_file() (crunchflow.input.AqueousDatabase class method) (crunchflow.input.databases.aqueous.AqueousDatabase class method) (crunchflow.input.databases.aqueous.database.AqueousDatabase class method) (crunchflow.input.databases.AqueousDatabase class method) (crunchflow.input.databases.thermo.database.ThermoDatabase class method) (crunchflow.input.databases.thermo.ThermoDatabase class method) (crunchflow.input.databases.ThermoDatabase class method) (crunchflow.input.ThermoDatabase class method)

G

get_float() (in module crunchflow.output.speciation) get_out_output_time() (in module crunchflow.output.spatial) get_tec_metadata() (in module crunchflow.output.spatial)

get_tec_output_times() (in module crunchflow.output.spatial) get_ts_coords() (in module crunchflow.output.timeseries) get_ts_duplicates() (in module crunchflow.output.timeseries)

I

isnumeric_scientific() (in module crunchflow.output.spatial)

L

load() (crunchflow.input.InputFile class method) (crunchflow.input.inputfile.InputFile class method)

M

module crunchflow crunchflow.input crunchflow.input.blocks crunchflow.input.databases crunchflow.input.databases.aqueous crunchflow.input.databases.aqueous.database crunchflow.input.databases.aqueous.database_entities crunchflow.input.databases.common crunchflow.input.databases.thermo crunchflow.input.databases.thermo.database crunchflow.input.databases.thermo.database_entities crunchflow.input.inputfile crunchflow.output crunchflow.output.main_output crunchflow.output.spatial crunchflow.output.speciation crunchflow.output.timeseries crunchflow.util

O

outline() (crunchflow.output.spatial.SpatialProfile method) (crunchflow.output.SpatialProfile method)

P

plot() (crunchflow.output.spatial.SpatialProfile method) (crunchflow.output.SpatialProfile method) (crunchflow.output.TimeSeries method) (crunchflow.output.timeseries.TimeSeries method)

plot_series() (crunchflow.output.spatial.SpatialProfile method) (crunchflow.output.SpatialProfile method)

R

read() (crunchflow.input.AqueousDatabase method) (crunchflow.input.databases.aqueous.AqueousDatabase method) (crunchflow.input.databases.aqueous.database.AqueousDatabase method) (crunchflow.input.databases.AqueousDatabase method) (crunchflow.input.databases.thermo.database.ThermoDatabase method) (crunchflow.input.databases.thermo.ThermoDatabase method) (crunchflow.input.databases.ThermoDatabase method) (crunchflow.input.ThermoDatabase method)

read_output_times() (in module crunchflow.output.spatial)

S

save() (crunchflow.input.InputFile method) (crunchflow.input.inputfile.InputFile method) set_block() (crunchflow.input.InputFile method) (crunchflow.input.inputfile.InputFile method) set_parameters() (crunchflow.input.blocks.AqueousKinetics method) (crunchflow.input.blocks.BoundaryConditions method) (crunchflow.input.blocks.Condition method) (crunchflow.input.blocks.DatabaseBlock method) (crunchflow.input.blocks.Discretization method) (crunchflow.input.blocks.Erosion method) (crunchflow.input.blocks.Flow method) (crunchflow.input.blocks.Gases method) (crunchflow.input.blocks.InitialConditions method) (crunchflow.input.blocks.IonExchange method) (crunchflow.input.blocks.Isotopes method) (crunchflow.input.blocks.KeywordBlock method) (crunchflow.input.blocks.KineticsBlock method) (crunchflow.input.blocks.Minerals method) (crunchflow.input.blocks.Output method) (crunchflow.input.blocks.Pest method) (crunchflow.input.blocks.Porosity method) (crunchflow.input.blocks.PrimarySpecies method) (crunchflow.input.blocks.Runtime method) (crunchflow.input.blocks.SecondarySpecies method) (crunchflow.input.blocks.SpeciesBlock method) (crunchflow.input.blocks.SurfaceComplexation method) (crunchflow.input.blocks.Temperature method) (crunchflow.input.blocks.Title method) (crunchflow.input.blocks.Transport method) (crunchflow.input.Condition method) (crunchflow.input.KeywordBlock method)

U

update_parameters() (crunchflow.input.blocks.AqueousKinetics method) (crunchflow.input.blocks.KineticsBlock method) (crunchflow.input.blocks.Minerals method)

W

write() (crunchflow.input.AqueousDatabase method) (crunchflow.input.databases.aqueous.AqueousDatabase method) (crunchflow.input.databases.aqueous.database.AqueousDatabase method) (crunchflow.input.databases.AqueousDatabase method) (crunchflow.input.databases.thermo.database.ThermoDatabase method) (crunchflow.input.databases.thermo.ThermoDatabase method) (crunchflow.input.databases.ThermoDatabase method) (crunchflow.input.ThermoDatabase method)