crunchflow.output

The crunchflow.output subpackage provides tools for loading, parsing, and analyzing output files generated by CrunchFlow and CrunchTope simulations.

It includes specialized classes for handling:

• Spatial profiles of variables at different output times, with support for 2D/3D gridded visualization (SpatialProfile)

• Time series data extracted at specific cells in the model domain (TimeSeries)

• Main output files containing speciation data for each geochemical condition (MainOutputFile, Speciation)

These modules enable users to extract numerical results, plot chemical concentrations and spatial gradients, and integrate CrunchFlow output into custom Python workflows for postprocessing, visualization, and model diagnostics.

Submodules

• crunchflow.output.main_output
• crunchflow.output.spatial
• crunchflow.output.speciation
• crunchflow.output.timeseries

Classes

MainOutputFile	Parses a CrunchFlow main output file to extract speciation blocks.
SpeciationBlockCollection	A specialized dictionary to hold multiple Speciation objects keyed by condition name.
SpatialProfile	The SpatialProfile class for working with spatial_profile (.tec, .out and .dat) files.
Speciation	A class for parsing and storing the results from a single speciation block
TimeSeries	The timeseries class for working with CrunchFlow time